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  • Nov 4, 2025, 6:59 AM

    Last week Vedran and Matúš visited me for a head start on this week's BioHackathon. We were kindly hosted by Dr. Sven Twardziok at Charité/BIH. With Vedran we dug into the cwljava library and after I made several fixes he opened github.com/sanctuuary/APE/pull
    To follow on with that I will be finally releasing the cwljava library on the Maven Central Repository.
    With Matúš we discussed the ongoing work to expand the edamontology.org to more domains, specifically Earth Observation / Geo. He showed me some previous unreleased work and we scheduled a meeting for today with Lorenz Grouper and colleagues, whom I was recently introduced to by Iacopo Colonnelli as part of our CWL4HPC work.

    Two research software engineers, Michael and Vedran, smile for the camera. They are in the Charité/BIH (Berlin Institute of Health) co-working space.
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